Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890226.1_cds_XP_016444900.1_39916
CDS Infomation

[gene=LOC107770142] [db_xref=GeneID:107770142] [protein=pectinesterase 2-like] [protein_id=XP_016444900.1] [location=join(135693..136581,137087..137775)] [gbkey=CDS]
Sequence

ATGACATACATAACAATGTCCAATATCTATTTGATTTTCCCACTTTTATTTGTGTCTTCT
TTCTTTTTCCCATCCACCAATGGCTACTCTCAGGCAGCCATAAAATTTTGGTGTATCCAA
ACACCTCACCCACAACCTTGTGAATACTTCTTGACACAAAATCCTAAATATTCAACTCCT
ATCAACAAAAAATCCGATTTTCTCAAAGTGTCACTAGAATTAGCCCTAGACCGTGCCTTA
CGTGCCCAAACGAACGCATATTCACTAGGTTCAAAATGTCGTAACGAGCGTGAAAAAGCT
GCATGGGCTGATTGTCTTGAACTATATGAAAATACTATCCACAAGATCAAAAGCACAGTT
GGTCCAAATACTAAATGCACAGCTGCTGATGCTCAATCATGGTTAAGTACAGCCTTAACC
AACCTCGAAACATGCAGAGCTGGTTTTGAAGAACTTGGGGTCACGGATTATGTGATGCCA
TTAATGTCAAATAATGTTTCATCTTTAATTAGTAACACTTTGTCTTTGAACCATGGTTAC
TATACTGAGCCAACTGCAACTCAAGTAGATGGTTTTCCAACTTGGGTTGCACTTGGTGAT
CGGAAACTATTGCAATCATCTTCTCCAGCATCTCAGGCTAATATAGTTGTTGCAAAAGAT
GGTTCGGGGAATTTCAAGACTGTGAAAGAAGCTGTTGCTGCTGCTGGCAAGAGGAAAGGA
AGTGCAAGGTTTGTGATATATGTGAAGGCAGGAATTTACAGCGAAAATGTGGATTTAGGA
TCTAAGTTGAAGAATATAATGTTAGTTGGAGATGGAATTGGAAAGACAATTATCACAGGA
AGCAAGAGTGTTGGAGGAGGATCCACCACCTTCAAATCAGCCACTGTTGCCGTTGTCGGT
GATGGATTTATTTGTCGAGGCATAACAATTAGGAACACTGCTGGGCCCACAAACCACCAA
GCAGTAGCTCTTCGATCTGGCTCAGACCTTTCAGTATTTTATCAATGTAGTTTTGAGGGG
TACCAAGACACTCTTTATGTCCACTCTGATAGACAATTTTACAGAGAATGTGATATTTAT
GGTACAGTTGATTTCATATTCGGAAACGCAGCAGTTGTGTTACAAAATTGTAACATTTTT
GCTAGAGATCCTCCAAACAAGACCAACACTGTGACAGCACAAGGGAGAAGTGATCCAAAC
CAAAACACTGGAATTTCAATTCACAATTGTAGAGTCACAGCTGCTTCGGATTTAAAGGCT
TCTAAAAACTCAGTTAAGACATATTTAGGAAGGCCATGGAAACAATATTCACGTACTGTT
GTCATGAAAACGTTCCTCGATAGCTTGATTCAACCAGATGGTTGGATGCCATGGAGTGGT
ACTTTCGCGCTGAAAACATTGTACTATGGAGAATACTTGAACACTGGTCCTGGCTCGTCA
ACTGCAAATAGGGTTAAATGGGGTGGTTATCGTGTTATTACAAGTGCTGCTGAGGCATCC
AAATTCACACCTGCTAATTTCATTGCTGGAAATTCTTGGTTGCCAGCCACCAACGTGCCA
TTCACTTCTGGTCTTTGA

Peptide Sequence

PEP ID

XP_016444900.1
PEP Infomation

PREDICTED: pectinesterase 2-like [Nicotiana tabacum]
Sequence

MTYITMSNIYLIFPLLFVSSFFFPSTNGYSQAAIKFWCIQTPHPQPCEYFLTQNPKYSTP
INKKSDFLKVSLELALDRALRAQTNAYSLGSKCRNEREKAAWADCLELYENTIHKIKSTV
GPNTKCTAADAQSWLSTALTNLETCRAGFEELGVTDYVMPLMSNNVSSLISNTLSLNHGY
YTEPTATQVDGFPTWVALGDRKLLQSSSPASQANIVVAKDGSGNFKTVKEAVAAAGKRKG
SARFVIYVKAGIYSENVDLGSKLKNIMLVGDGIGKTIITGSKSVGGGSTTFKSATVAVVG
DGFICRGITIRNTAGPTNHQAVALRSGSDLSVFYQCSFEGYQDTLYVHSDRQFYRECDIY
GTVDFIFGNAAVVLQNCNIFARDPPNKTNTVTAQGRSDPNQNTGISIHNCRVTAASDLKA
SKNSVKTYLGRPWKQYSRTVVMKTFLDSLIQPDGWMPWSGTFALKTLYYGEYLNTGPGSS
TANRVKWGGYRVITSAAEASKFTPANFIAGNSWLPATNVPFTSGL

Transcript Sequence

Gene sequence data has not been registered.